Question: Usinging Pedalboard Switches and Controllers

I configured my wah to be turned on/off by the toe switch of my Mission SP1 using an external controller. This seems to have disabled the switch on the pedal board. Even when I try to turn the effect on in the editor it gives me a pop up saying the function is prevented by a controller. Is it possible to have both control the bypass function of the wah? It would be cool to use the pedalboard switch to turn on/off a fixed wah sound on the fly.
 
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