That's a great story, seriously, no sarcasm.
But having been dealing with AVID since 1992 or 1993 I can tell you that their business model is completely different for one thing. AVID is so steeped into proprietary hardware and software that they will do whatever it takes to get you into their grasp because they know that once you start investing a few bucks into them you are pretty much committed for the long haul. Knock a few bucks off an item that they are replacing doesn't hurt them in the short term because getting anything for old inventory is better than nothing, but they see the long term investment and potential better than any company I've ever dealt with.
Hook you up with a decent price on something and reap the benefits when you start buying more software, more plug-ins, the new hardware that is compatible with all the software and plug-ins you now own; etc, etc...
Fractal on the other hand sells basically one product and once its out the door there is no additional income. AVID even charges for updates to 11R. Sure you've got a smaller initial investment, but why do you think that it comes with ProTools and the editor only works in PT? Because it's like a starter drug; get your fingers in there and they get you hooked.
I have no idea what kind of profit and markup are on the AxeFX's that were sold in the last days, but with a $200 markup for the new system that contains an additional $200 DSP chip I am not thinking that he had a lot of wiggle room to blow out old stock; especially with no long term return. He paid for those to be built under the same business model he had for years; his investment was the same and the product he sold was the same.
A man's gotta eat. AVID on the other hand is probably worth billions of dollars and has share holders and owns m-audio, digidesign and a whole slew of other companies. Hell they just built their Interplay asset manager by buying out some other company because it was easier than writing the code from the ground up. They can afford to cut you a deal; especially when their markup is probably a lot more significant and the long term return is potentially insane.