AFIII Mac AFX USB inputs swapped?

Tom Morris

Power User
I notice when recording in Mac any recording software that the left and right are swapped right is on the left and left is on the right. Am I missing a setting somewhere. This is opposite of the AFX headphone jack.
 
Well hell just realized I had left and right swapped coming out of my Belkin thunderbolt dock going into my mixer. Been connected this way since getting a new MBP. Which mean all the time Ive spent making sure my guitar is panned properly in all the songs I been working on are backwards. FML!
 
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